Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E5E93_20350 | Not Available | Positive | 4180551 - 4180769 | 7965.7 |
| formate hydrogenlyase regulatory protein hyca | E5E93_20355 | Not Available | Positive | 4180857 - 4181318 | 17627.9 |
| 4fe-4s dicluster domain-containing protein | E5E93_20360 | Not Available | Positive | 4181443 - 4182054 | 21874.4 |
| formate hydrogenlyase subunit 3 | E5E93_20365 | Not Available | Positive | 4182051 - 4183877 | 64099.1 |
| formate hydrogenlyase subunit hycd | E5E93_20370 | Not Available | Positive | 4183880 - 4184803 | 33031.4 |
| hydrogenase large subunit | E5E93_20375 | Not Available | Positive | 4184821 - 4186530 | 65000.1 |
| formate hydrogenlyase subunit hycf | E5E93_20380 | Not Available | Positive | 4186540 - 4187082 | 20329.4 |
| formate hydrogenlyase subunit hycg | E5E93_20385 | Not Available | Positive | 4187082 - 4187849 | 28015.7 |
| formate hydrogenlyase maturation protein hych | E5E93_20390 | Not Available | Positive | 4187846 - 4188256 | 15451.5 |
| hydrogenase maturation peptidase hyci | E5E93_20395 | Not Available | Positive | 4188249 - 4188719 | 17057.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





