Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubid family decarboxylase | E5E93_20295 | Not Available | Positive | 4169162 - 4170589 | 52367.8 |
| hypothetical protein | E5E93_20300 | Not Available | Positive | 4170600 - 4170836 | 9208.12 |
| protein-serine/threonine phosphatase | E5E93_20305 | Not Available | Negative | 4170877 - 4171533 | 25162.7 |
| dna mismatch repair protein muts | E5E93_20310 | Not Available | Negative | 4171639 - 4174200 | 95224.5 |
| nitrous oxide-stimulated promoter family protein | E5E93_20315 | Not Available | Positive | 4174487 - 4174840 | 13964.2 |
| formate hydrogenlyase transcriptional activator flha | E5E93_20320 | Not Available | Negative | 4174877 - 4176955 | 78457.5 |
| hydrogenase maturation carbamoyl dehydratase hype | E5E93_20325 | Not Available | Negative | 4177029 - 4178039 | 35110.6 |
| hydrogenase formation protein hypd | E5E93_20330 | Not Available | Negative | 4178036 - 4179157 | 41366.7 |
| hydrogenase nickel incorporation protein hypb | E5E93_20340 | Not Available | Negative | 4179419 - 4180291 | 31566.8 |
| hydrogenase maturation nickel metallochaperone hypa | E5E93_20345 | Not Available | Negative | 4180295 - 4180645 | 13183.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





