Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphomethylpyrimidine synthase thic | E5E93_19715 | Not Available | Positive | 4041062 - 4042957 | 70894.5 |
| thiazole biosynthesis adenylyltransferase thif | E5E93_19725 | Not Available | Positive | 4043584 - 4044339 | 26971.4 |
| sulfur carrier protein this | E5E93_19730 | Not Available | Positive | 4044323 - 4044523 | 7337.8 |
| thiazole synthase | E5E93_19735 | Not Available | Positive | 4044525 - 4045295 | 26901.7 |
| 2-iminoacetate synthase thih | E5E93_19740 | Not Available | Positive | 4045292 - 4046425 | 43338.6 |
| heat-shock protein c | E5E93_19745 | Not Available | Negative | 4046835 - 4047374 | 21132.2 |
| dna-directed rna polymerase subunit beta' | E5E93_19750 | Not Available | Negative | 4047587 - 4051810 | 155169.0 |
| dna-directed rna polymerase subunit beta | E5E93_19755 | Not Available | Negative | 4051887 - 4055915 | 150641.0 |
| 50s ribosomal protein l10 | E5E93_19765 | Not Available | Negative | 4056669 - 4057166 | 17712.6 |
| 50s ribosomal protein l1 | E5E93_19770 | Not Available | Negative | 4057579 - 4058283 | 24731.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





