Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent response regulator transcription factor zrar | E5E93_19665 | Not Available | Negative | 4032542 - 4033867 | 48385.4 |
| two-component system sensor histidine kinase zras | E5E93_19670 | Not Available | Negative | 4033864 - 4035240 | 50564.1 |
| zinc resistance sensor/chaperone zrap | E5E93_19675 | Not Available | Positive | 4035478 - 4035897 | 15042.1 |
| duf1481 domain-containing protein | E5E93_19680 | Not Available | Negative | 4035899 - 4036594 | 26352.9 |
| dna-binding protein hu-alpha | E5E93_19685 | Not Available | Negative | 4036607 - 4036879 | 9535.51 |
| duf416 family protein | E5E93_19690 | Not Available | Negative | 4037066 - 4037656 | 22613.9 |
| deoxyribonuclease v | E5E93_19695 | Not Available | Negative | 4037699 - 4038370 | 24692.0 |
| uroporphyrinogen decarboxylase | E5E93_19700 | Not Available | Negative | 4038380 - 4039444 | 39293.4 |
| nad(+) diphosphatase | E5E93_19705 | Not Available | Negative | 4039484 - 4040257 | 29704.6 |
| sigma d regulator | E5E93_19710 | Not Available | Positive | 4040352 - 4040828 | 18243.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





