Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type-f conjugative transfer system pilin assembly protein traf | E5E93_19505 | Not Available | Positive | 4006199 - 4006942 | 28004.6 |
| conjugal transfer protein trba | E5E93_19510 | Not Available | Positive | 4006958 - 4007305 | 12945.4 |
| toxin arta | E5E93_19515 | Not Available | Negative | 4007307 - 4007621 | 12111.2 |
| hypothetical protein | E5E93_19520 | Not Available | Negative | 4007602 - 4007781 | 6811.51 |
| type-f conjugative transfer system pilin chaperone traq | E5E93_19525 | Not Available | Positive | 4007749 - 4007985 | 9008.01 |
| type-f conjugative transfer system pilin assembly thiol-disulfide isomerase trbb | E5E93_19530 | Not Available | Positive | 4007972 - 4008517 | 19896.2 |
| p-type conjugative transfer protein trbj | E5E93_19535 | Not Available | Positive | 4008447 - 4008788 | 12587.5 |
| conjugal transfer protein trbf | E5E93_19540 | Not Available | Positive | 4008742 - 4009155 | 15966.3 |
| conjugal transfer protein trah | E5E93_19545 | Not Available | Positive | 4009152 - 4010528 | 50323.3 |
| conjugal transfer protein trag | E5E93_19550 | Not Available | Positive | 4010525 - 4013347 | 102683.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





