Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trbg | E5E93_19455 | Not Available | Positive | 3997563 - 3997814 | 9126.86 |
| type iv conjugative transfer system protein trav | E5E93_19460 | Not Available | Positive | 3997811 - 3998326 | 18497.2 |
| conjugal transfer protein trar | E5E93_19465 | Not Available | Positive | 3998461 - 3998682 | 8329.95 |
| type iv secretion system protein trac | E5E93_19470 | Not Available | Positive | 3998842 - 4001469 | 99195.3 |
| type-f conjugative transfer system protein trbi | E5E93_19475 | Not Available | Positive | 4001466 - 4001852 | 14146.9 |
| type-f conjugative transfer system protein traw | E5E93_19480 | Not Available | Positive | 4001849 - 4002481 | 23603.7 |
| protein trau | E5E93_19485 | Not Available | Positive | 4002478 - 4003470 | 36770.5 |
| type-f conjugative transfer system pilin assembly protein trbc | E5E93_19490 | Not Available | Positive | 4003479 - 4004117 | 23482.3 |
| type-f conjugative transfer system mating-pair stabilization protein tran | E5E93_19495 | Not Available | Positive | 4004114 - 4005922 | 65676.1 |
| conjugal transfer protein trbe | E5E93_19500 | Not Available | Positive | 4005949 - 4006206 | 9779.94 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





