Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase | E5E93_19400 | Not Available | Negative | 3990808 - 3991410 | 22864.8 |
| relaxosome protein tram | E5E93_19405 | Not Available | Positive | 3991750 - 3992133 | 14443.3 |
| conjugal transfer transcriptional regulator traj | E5E93_19410 | Not Available | Positive | 3992324 - 3992971 | 25073.3 |
| conjugal transfer relaxosome protein tray | E5E93_19415 | Not Available | Positive | 3993107 - 3993322 | 8133.65 |
| pilin | E5E93_19420 | Not Available | Positive | 3993365 - 3993730 | 12798.3 |
| type iv conjugative transfer system protein tral | E5E93_19425 | Not Available | Positive | 3993745 - 3994056 | 11904.7 |
| type iv conjugative transfer system protein trae | E5E93_19430 | Not Available | Positive | 3994078 - 3994644 | 21179.4 |
| type-f conjugative transfer system secretin trak | E5E93_19435 | Not Available | Positive | 3994688 - 3995359 | 23542.1 |
| conjugal transfer protein trap | E5E93_19445 | Not Available | Positive | 3996777 - 3997367 | 22068.7 |
| duf2689 domain-containing protein | E5E93_19450 | Not Available | Positive | 3997321 - 3997551 | 8300.01 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





