Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| parb/repb/spo0j family plasmid partition protein | E5E93_19250 | Not Available | Positive | 3973754 - 3974725 | 35374.3 |
| hypothetical protein | E5E93_19255 | Not Available | Positive | 3975153 - 3975425 | 9703.94 |
| dna methylase | E5E93_19270 | Not Available | Positive | 3976743 - 3977426 | 25460.5 |
| hypothetical protein | E5E93_19275 | Not Available | Positive | 3977427 - 3977648 | 8591.31 |
| antirestriction protein | E5E93_19295 | Not Available | Positive | 3979220 - 3979522 | 11570.7 |
| duf1380 domain-containing protein | E5E93_19300 | Not Available | Positive | 3979569 - 3979991 | 15695.6 |
| hypothetical protein | E5E93_19305 | Not Available | Positive | 3979988 - 3980179 | 7236.73 |
| hypothetical protein | E5E93_19315 | Not Available | Positive | 3980298 - 3980687 | 13662.5 |
| single-stranded dna-binding protein | E5E93_19320 | Not Available | Positive | 3980831 - 3980950 | 4331.39 |
| hypothetical protein | E5E93_19325 | Not Available | Positive | 3981174 - 3981404 | 8582.57 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





