Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific recombinase | E5E93_19185 | Not Available | Positive | 3961976 - 3962716 | 28165.5 |
| repb family plasmid replication initiator protein | E5E93_19190 | Not Available | Negative | 3962995 - 3963972 | 37286.0 |
| hypothetical protein | E5E93_19195 | Not Available | Positive | 3964285 - 3964512 | 8625.3 |
| abortive phage infection protein | E5E93_19205 | Not Available | Negative | 3965861 - 3966601 | 27580.6 |
| duf2971 domain-containing protein | E5E93_19210 | Not Available | Negative | 3966637 - 3967425 | 30270.2 |
| hypothetical protein | E5E93_19215 | Not Available | Negative | 3967422 - 3968042 | 23740.7 |
| hypothetical protein | E5E93_19220 | Not Available | Negative | 3968039 - 3968722 | 25235.2 |
| type ii toxin-antitoxin system antitoxin ccda | E5E93_19225 | Not Available | Positive | 3969190 - 3969408 | 8372.8 |
| type ii toxin-antitoxin system toxin ccdb | E5E93_19230 | Not Available | Positive | 3969410 - 3969715 | 11707.2 |
| phage integrase family protein | E5E93_19235 | Not Available | Positive | 3969716 - 3970522 | 29629.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





