Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E5E93_19015 | Not Available | Negative | 3923659 - 3923853 | 6759.1 |
| phosphoenolpyruvate--protein phosphotransferase | E5E93_19025 | Not Available | Positive | 3924707 - 3926953 | 83750.8 |
| prolipoprotein diacylglyceryl transferase | E5E93_19030 | Not Available | Positive | 3927104 - 3927979 | 33075.9 |
| thymidylate synthase | E5E93_19035 | Not Available | Positive | 3927986 - 3928780 | 30481.4 |
| prepilin peptidase-dependent protein | E5E93_19045 | Not Available | Positive | 3928966 - 3929436 | 17866.3 |
| prepilin peptidase-dependent protein | E5E93_19050 | Not Available | Positive | 3929427 - 3929990 | 20567.6 |
| duf2509 family protein | E5E93_19055 | Not Available | Positive | 3929987 - 3930394 | 14900.1 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | E5E93_19060 | Not Available | Positive | 3930379 - 3930702 | 11956.6 |
| exodeoxyribonuclease v subunit gamma | E5E93_19065 | Not Available | Positive | 3930715 - 3934083 | 128786.0 |
| is21-like element is100 family transposase | E5E93_19075 | Not Available | Negative | 3935967 - 3936710 | 29039.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





