Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-dehydro-4-deoxy-d-glucuronate isomerase | E5E93_18945 | Not Available | Positive | 3909013 - 3909849 | 31078.1 |
| aspartate/glutamate racemase | E5E93_18960 | Not Available | Positive | 3912504 - 3913196 | 25309.5 |
| lysr family transcriptional regulator | E5E93_18965 | Not Available | Negative | 3913183 - 3914118 | 34424.7 |
| diaminopimelate decarboxylase | E5E93_18970 | Not Available | Positive | 3914240 - 3915502 | 46180.0 |
| hth-type transcriptional regulator galr | E5E93_18975 | Not Available | Negative | 3915509 - 3916540 | 37110.2 |
| bifunctional acyl-acp--phospholipid o-acyltransferase/long-chain-fatty-acid--acp ligase | E5E93_18985 | Not Available | Positive | 3917121 - 3919286 | 80947.1 |
| nadp(h)-dependent aldo-keto reductase | E5E93_18995 | Not Available | Negative | 3920505 - 3921545 | 38501.7 |
| lipoprotein ygdr | E5E93_19000 | Not Available | Negative | 3921653 - 3921871 | 7877.35 |
| terc family protein | E5E93_19005 | Not Available | Negative | 3922009 - 3922722 | 26159.0 |
| dna mismatch repair endonuclease muth | E5E93_19010 | Not Available | Negative | 3922791 - 3923480 | 25500.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





