Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yjbf family lipoprotein | E5E93_18815 | Not Available | Negative | 3878541 - 3879179 | 23798.3 |
| hypothetical protein | E5E93_18820 | Not Available | Negative | 3879293 - 3879535 | 7386.46 |
| glucose-6-phosphate isomerase | E5E93_18825 | Not Available | Negative | 3879891 - 3881540 | 61475.1 |
| lysine-sensitive aspartokinase 3 | E5E93_18835 | Not Available | Positive | 3882065 - 3883414 | 48566.6 |
| zeta toxin | E5E93_18840 | Not Available | Positive | 3883559 - 3884485 | 34499.5 |
| nucleotidyltransferase domain-containing protein | E5E93_18845 | Not Available | Negative | 3884521 - 3885312 | 30507.6 |
| slipin family protein | E5E93_18850 | Not Available | Negative | 3885318 - 3886445 | 42349.5 |
| duf3811 domain-containing protein | E5E93_18855 | Not Available | Positive | 3886977 - 3887249 | 10546.7 |
| 23s rrna pseudouridine(2604) synthase rluf | E5E93_18860 | Not Available | Negative | 3887250 - 3888122 | 32434.4 |
| dipeptidase pepe | E5E93_18865 | Not Available | Positive | 3888334 - 3889023 | 24571.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





