Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mmcq/yjbr family dna-binding protein | E5E93_18645 | Not Available | Negative | 3844563 - 3844919 | 13520.2 |
| yjbq family protein | E5E93_18650 | Not Available | Negative | 3844923 - 3845339 | 15656.8 |
| class b acid phosphatase | E5E93_18655 | Not Available | Negative | 3845450 - 3846163 | 26104.9 |
| hypothetical protein | E5E93_18665 | Not Available | Positive | 3846801 - 3847052 | 9817.69 |
| aromatic amino acid transaminase | E5E93_18670 | Not Available | Negative | 3847274 - 3848467 | 43522.1 |
| alanine racemase | E5E93_18675 | Not Available | Negative | 3848719 - 3849798 | 39155.2 |
| replicative dna helicase dnab | E5E93_18680 | Not Available | Negative | 3849851 - 3851266 | 52393.1 |
| quinone oxidoreductase | E5E93_18685 | Not Available | Positive | 3851349 - 3852332 | 35173.2 |
| envelope stress response protein pspg | E5E93_18690 | Not Available | Negative | 3852498 - 3852740 | 9056.07 |
| trna dihydrouridine(20/20a) synthase dusa | E5E93_18695 | Not Available | Negative | 3852874 - 3853911 | 38470.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





