Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate/aspartate:proton symporter gltp | E5E93_18540 | Not Available | Negative | 3819785 - 3821098 | 47107.0 |
| heme lyase nrfefg subunit nrfg | E5E93_18545 | Not Available | Negative | 3821440 - 3822036 | 22773.5 |
| heme lyase nrfefg subunit nrff | E5E93_18550 | Not Available | Negative | 3822033 - 3822416 | 14543.0 |
| cytochrome c nitrite reductase subunit nrfd | E5E93_18560 | Not Available | Negative | 3824146 - 3825102 | 35122.5 |
| cytochrome c nitrite reductase fe-s protein | E5E93_18565 | Not Available | Negative | 3825099 - 3825770 | 24568.8 |
| cytochrome c nitrite reductase pentaheme subunit | E5E93_18570 | Not Available | Negative | 3825767 - 3826333 | 20669.6 |
| ammonia-forming nitrite reductase cytochrome c552 subunit | E5E93_18575 | Not Available | Negative | 3826378 - 3827814 | 53705.7 |
| acetate--coa ligase | E5E93_18580 | Not Available | Positive | 3828207 - 3830165 | 72097.5 |
| duf485 domain-containing protein | E5E93_18585 | Not Available | Positive | 3830365 - 3830679 | 11672.3 |
| cation/acetate symporter actp | E5E93_18590 | Not Available | Positive | 3830676 - 3832325 | 59186.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





