Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s2 | E5E93_18255 | Not Available | Positive | 3759814 - 3760539 | 26745.2 |
| elongation factor ts | E5E93_18260 | Not Available | Positive | 3760797 - 3761648 | 30408.7 |
| ump kinase | E5E93_18265 | Not Available | Positive | 3761795 - 3762520 | 25971.9 |
| ribosome recycling factor | E5E93_18270 | Not Available | Positive | 3762671 - 3763228 | 20639.7 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | E5E93_18275 | Not Available | Positive | 3763320 - 3764516 | 43404.6 |
| (2e,6e)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase | E5E93_18280 | Not Available | Positive | 3764707 - 3765465 | 28314.5 |
| phosphatidate cytidylyltransferase | E5E93_18285 | Not Available | Positive | 3765478 - 3766335 | 31455.6 |
| sigma e protease regulator rsep | E5E93_18290 | Not Available | Positive | 3766347 - 3767699 | 49074.2 |
| outer membrane protein assembly factor bama | E5E93_18295 | Not Available | Positive | 3767729 - 3770161 | 90557.5 |
| molecular chaperone skp | E5E93_18300 | Not Available | Positive | 3770283 - 3770768 | 17689.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





