Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase-binding transcription factor dksa | E5E93_18140 | Not Available | Negative | 3730907 - 3731362 | 17528.7 |
| rna 2',3'-cyclic phosphodiesterase | E5E93_18150 | Not Available | Negative | 3732260 - 3732790 | 19964.1 |
| atp-dependent helicase hrpb | E5E93_18155 | Not Available | Positive | 3732864 - 3735293 | 89110.1 |
| ferrichrome porin fhua | E5E93_18165 | Not Available | Positive | 3738137 - 3740380 | 82185.5 |
| fe3+-hydroxamate abc transporter atp-binding protein fhuc | E5E93_18170 | Not Available | Positive | 3740431 - 3741228 | 28872.2 |
| fe(3+)-hydroxamate abc transporter substrate-binding protein fhud | E5E93_18175 | Not Available | Positive | 3741228 - 3742118 | 33000.2 |
| fe(3+)-hydroxamate abc transporter permease fhub | E5E93_18180 | Not Available | Positive | 3742115 - 3744097 | 70412.6 |
| glutamate-1-semialdehyde 2,1-aminomutase | E5E93_18185 | Not Available | Negative | 3744255 - 3745535 | 45358.7 |
| hypothetical protein | E5E93_18195 | Not Available | Positive | 3747206 - 3747271 | 2329.94 |
| iron-sulfur cluster insertion protein erpa | E5E93_18200 | Not Available | Positive | 3747264 - 3747608 | 12101.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





