Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| seca regulator secm | E5E93_17865 | Not Available | Positive | 3672223 - 3672735 | 18866.6 |
| preprotein translocase subunit seca | E5E93_17870 | Not Available | Positive | 3672797 - 3675502 | 101971.0 |
| 8-oxo-dgtp diphosphatase mutt | E5E93_17875 | Not Available | Positive | 3675562 - 3675960 | 15164.1 |
| dna gyrase inhibitor yacg | E5E93_17880 | Not Available | Negative | 3676050 - 3676247 | 7306.49 |
| cell division protein zapd | E5E93_17885 | Not Available | Negative | 3676257 - 3677000 | 28265.3 |
| dephospho-coa kinase | E5E93_17890 | Not Available | Negative | 3677000 - 3677620 | 22550.9 |
| gmp reductase | E5E93_17895 | Not Available | Positive | 3677846 - 3678889 | 37385.8 |
| protein transport protein hofc | E5E93_17900 | Not Available | Negative | 3678924 - 3680126 | 44374.2 |
| type ii secretion system protein gspe | E5E93_17905 | Not Available | Negative | 3680116 - 3681501 | 50636.4 |
| prepilin peptidase-dependent pilin | E5E93_17910 | Not Available | Negative | 3681511 - 3681951 | 15592.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





