Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine/thiamine pyrophosphate abc transporter permease thip | E5E93_17710 | Not Available | Negative | 3637428 - 3639038 | 59380.5 |
| thiamine abc transporter substrate binding subunit | E5E93_17715 | Not Available | Negative | 3639014 - 3639997 | 36208.3 |
| hth-type transcriptional regulator sgrr | E5E93_17720 | Not Available | Negative | 3640161 - 3641816 | 64007.7 |
| glucose uptake inhibitor sgrt | E5E93_17725 | Not Available | Positive | 3641905 - 3642036 | 5338.42 |
| sugar efflux transporter seta | E5E93_17730 | Not Available | Positive | 3642138 - 3643316 | 42738.9 |
| 3-isopropylmalate dehydratase small subunit | E5E93_17735 | Not Available | Negative | 3643365 - 3643970 | 22488.7 |
| 3-isopropylmalate dehydratase large subunit | E5E93_17740 | Not Available | Negative | 3643981 - 3645381 | 49884.7 |
| 3-isopropylmalate dehydrogenase | E5E93_17745 | Not Available | Negative | 3645384 - 3646475 | 39519.3 |
| 2-isopropylmalate synthase | E5E93_17750 | Not Available | Negative | 3646475 - 3648046 | 57287.1 |
| leu operon leader peptide | E5E93_17755 | Not Available | Negative | 3648139 - 3648225 | 3146.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





