Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly scaffold sufa | E5E93_17605 | Not Available | Positive | 3618978 - 3619346 | 13286.8 |
| fe-s cluster assembly protein sufb | E5E93_17610 | Not Available | Positive | 3619355 - 3620842 | 54748.1 |
| fe-s cluster assembly atpase sufc | E5E93_17615 | Not Available | Positive | 3620852 - 3621598 | 27531.0 |
| fe-s cluster assembly protein sufd | E5E93_17620 | Not Available | Positive | 3621573 - 3622844 | 46840.6 |
| cysteine desulfurase sufs | E5E93_17625 | Not Available | Positive | 3622841 - 3624061 | 44437.3 |
| cysteine desulfuration protein sufe | E5E93_17630 | Not Available | Positive | 3624074 - 3624490 | 15800.3 |
| l,d-transpeptidase ldte | E5E93_17635 | Not Available | Positive | 3624639 - 3625643 | 36109.5 |
| major outer membrane lipoprotein | E5E93_17640 | Not Available | Negative | 3625708 - 3625944 | 8323.95 |
| pyruvate kinase i | E5E93_17645 | Not Available | Negative | 3626255 - 3627667 | 50732.5 |
| fumarate hydratase fumd | E5E93_17650 | Not Available | Positive | 3628224 - 3628433 | 7907.85 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





