Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein insertion efficiency factor yidd | E5E93_17140 | Not Available | Negative | 3525982 - 3526197 | 8355.6 |
| duf4177 domain-containing protein | E5E93_17145 | Not Available | Negative | 3526197 - 3526433 | 8840.48 |
| methylglyoxal reductase yeae | E5E93_17150 | Not Available | Positive | 3526720 - 3527574 | 30960.4 |
| d-hexose-6-phosphate mutarotase | E5E93_17155 | Not Available | Negative | 3527625 - 3528509 | 32638.8 |
| glyceraldehyde-3-phosphate dehydrogenase | E5E93_17160 | Not Available | Negative | 3528593 - 3529588 | 35534.5 |
| peptide-methionine (r)-s-oxide reductase msrb | E5E93_17165 | Not Available | Positive | 3529930 - 3530343 | 15452.0 |
| duf1315 family protein | E5E93_17170 | Not Available | Positive | 3530385 - 3530657 | 10238.4 |
| bifunctional nicotinamidase/pyrazinamidase | E5E93_17175 | Not Available | Negative | 3530818 - 3531459 | 23340.2 |
| l-asparaginase 1 | E5E93_17180 | Not Available | Negative | 3531470 - 3532486 | 37129.5 |
| signal peptide peptidase sppa | E5E93_17185 | Not Available | Negative | 3532640 - 3534496 | 67204.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





