Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bame | E5E93_16980 | Not Available | Negative | 3496867 - 3497208 | 12302.8 |
| dna repair protein recn | E5E93_16985 | Not Available | Negative | 3497357 - 3499018 | 61401.1 |
| nad(+) kinase | E5E93_16990 | Not Available | Negative | 3499104 - 3499982 | 32568.3 |
| nucleotide exchange factor grpe | E5E93_16995 | Not Available | Positive | 3500105 - 3500698 | 21813.1 |
| duf21 domain-containing protein | E5E93_17000 | Not Available | Negative | 3500753 - 3502039 | 48028.1 |
| inner membrane protein ypjd | E5E93_17005 | Not Available | Negative | 3502060 - 3502851 | 29263.9 |
| 30s ribosomal protein s16 | E5E93_17015 | Not Available | Positive | 3504515 - 3504763 | 9191.08 |
| ribosome maturation factor rimm | E5E93_17020 | Not Available | Positive | 3504782 - 3505330 | 20606.6 |
| trna (guanosine(37)-n1)-methyltransferase trmd | E5E93_17025 | Not Available | Positive | 3505361 - 3506128 | 28424.0 |
| 50s ribosomal protein l19 | E5E93_17030 | Not Available | Positive | 3506169 - 3506516 | 13134.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





