Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| omph family outer membrane protein | E5E93_16920 | Not Available | Positive | 3490818 - 3491348 | 19701.9 |
| response regulator inhibitor tori | E5E93_16925 | Not Available | Negative | 3491874 - 3492074 | 7678.32 |
| hypothetical protein | E5E93_16930 | Not Available | Negative | 3492197 - 3492541 | 12724.4 |
| hypothetical protein | E5E93_16935 | Not Available | Negative | 3492568 - 3492735 | 6581.62 |
| hypothetical protein | E5E93_16940 | Not Available | Positive | 3492668 - 3492871 | 7521.97 |
| duf550 domain-containing protein | E5E93_16945 | Not Available | Negative | 3492836 - 3493471 | 23804.1 |
| Tmrna,resume consensus sequence (at 83): aatagtcgcaaacgacga | Not Available | Not Available | Positive | 3494858 - 3495220 | Not Available |
| ssra-binding protein smpb | E5E93_16965 | Not Available | Negative | 3495435 - 3495917 | 18270.1 |
| type ii toxin-antitoxin system toxin rata | E5E93_16970 | Not Available | Positive | 3496049 - 3496525 | 17743.7 |
| rnfh family protein | E5E93_16975 | Not Available | Positive | 3496515 - 3496805 | 10820.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





