Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| colanic acid biosynthesis lipoprotein ypdi | E5E93_16835 | Not Available | Negative | 3461241 - 3461516 | 10210.5 |
| yfdx family protein | E5E93_16840 | Not Available | Positive | 3461812 - 3462444 | 22907.4 |
| formyl-coa--oxalate coa-transferase | E5E93_16845 | Not Available | Positive | 3462957 - 3464207 | 45830.7 |
| oxalyl-coa decarboxylase | E5E93_16850 | Not Available | Positive | 3464261 - 3465955 | 60614.9 |
| coa:oxalate coa-transferase | E5E93_16860 | Not Available | Positive | 3467044 - 3468189 | 41695.3 |
| acid-sensing system histidine kinase evgs | E5E93_16865 | Not Available | Negative | 3468245 - 3471838 | 134806.0 |
| acid-sensing system dna-binding response regulator evga | E5E93_16870 | Not Available | Negative | 3471843 - 3472457 | 22691.5 |
| d-serine transporter dsdx | E5E93_16890 | Not Available | Negative | 3477030 - 3478367 | 47151.2 |
| dna-binding transcriptional regulator dsdc | E5E93_16895 | Not Available | Positive | 3478585 - 3479532 | 35917.8 |
| autotransporter outer membrane beta-barrel domain-containing protein | E5E93_16915 | Not Available | Positive | 3482851 - 3490770 | 270154.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





