Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded-dna-specific exonuclease recj | E5E93_00425 | Not Available | Negative | 94875 - 96608 | 63379.6 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 96893 - 97008 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 97086 - 100015 | Not Available |
| bifunctional protein-disulfide isomerase/oxidoreductase dsbc | E5E93_00430 | Not Available | Negative | 96614 - 97324 | 25625.1 |
| tyrosine recombinase xerd | E5E93_00435 | Not Available | Negative | 97349 - 98245 | 34248.4 |
| flavodoxin fldb | E5E93_00440 | Not Available | Positive | 98357 - 98878 | 19701.2 |
| toxin cpta | E5E93_00445 | Not Available | Negative | 98918 - 99325 | 16065.0 |
| fad assembly factor sdhe | E5E93_00450 | Not Available | Negative | 99306 - 99572 | 10547.7 |
| pp_00090 | E5E93_00455 | Not Available | Positive | 99816 - 100796 | Not Available |
| hemolysin iii family protein | E5E93_00460 | Not Available | Negative | 100873 - 101532 | 23848.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





