Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rpoe-regulated lipoprotein | E5E93_16565 | Not Available | Positive | 3407992 - 3408567 | 20829.6 |
| penicillin binding protein pbp4b | E5E93_16575 | Not Available | Negative | 3409619 - 3410923 | 47606.0 |
| pts n-acetylmuramic acid transporter subunit iibc | E5E93_16580 | Not Available | Negative | 3410928 - 3412352 | 49819.1 |
| n-acetylmuramic acid 6-phosphate etherase | E5E93_16585 | Not Available | Negative | 3412330 - 3413253 | 32171.8 |
| hth-type transcriptional regulator murr | E5E93_16590 | Not Available | Positive | 3413417 - 3414274 | 31213.6 |
| sdr family oxidoreductase ucpa | E5E93_16595 | Not Available | Positive | 3414403 - 3415194 | 27851.6 |
| sulfate abc transporter substrate-binding protein | E5E93_16600 | Not Available | Positive | 3415365 - 3416381 | 37629.6 |
| sulfate abc transporter permease | E5E93_16605 | Not Available | Positive | 3416381 - 3417214 | 30293.6 |
| sulfate abc transporter permease | E5E93_16610 | Not Available | Positive | 3417214 - 3418089 | 32539.6 |
| sulfate/thiosulfate abc transporter atp-binding protein cysa | E5E93_16615 | Not Available | Positive | 3418079 - 3419149 | 40188.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





