Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-barrel assembly-enhancing protease | E5E93_16285 | Not Available | Negative | 3348453 - 3349916 | 53942.1 |
| ai-2e family transporter | E5E93_16290 | Not Available | Positive | 3350129 - 3351190 | 39196.9 |
| formate transporter | E5E93_16295 | Not Available | Negative | 3351228 - 3352076 | 30607.4 |
| sigma-54-dependent fis family transcriptional regulator | E5E93_16300 | Not Available | Negative | 3352098 - 3354110 | 75284.7 |
| formate hydrogenlyase maturation protein hych | E5E93_16305 | Not Available | Negative | 3354140 - 3354553 | 15592.8 |
| hydrogenase 4 subunit h | E5E93_16315 | Not Available | Negative | 3355300 - 3355845 | 20130.4 |
| hydrogenase 4 catalytic subunit hyfg | E5E93_16320 | Not Available | Negative | 3355855 - 3357570 | 65019.0 |
| hydrogenase 4 subunit f | E5E93_16325 | Not Available | Negative | 3357560 - 3359140 | 56620.3 |
| hydrogenase 4 membrane subunit | E5E93_16330 | Not Available | Negative | 3359145 - 3359795 | 23363.0 |
| hydantoin racemase | E5E93_16340 | Not Available | Negative | 3360927 - 3361037 | 3991.92 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





