Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2633 family protein | E5E93_16235 | Not Available | Negative | 3336529 - 3336702 | 6856.35 |
| cyclic-guanylate-specific phosphodiesterase pdef | E5E93_16240 | Not Available | Positive | 3337072 - 3339315 | 85625.8 |
| exopolyphosphatase | E5E93_16245 | Not Available | Negative | 3339354 - 3340895 | 58139.5 |
| polyphosphate kinase 1 | E5E93_16250 | Not Available | Negative | 3340900 - 3342966 | 80436.1 |
| phosphoribosylglycinamide formyltransferase | E5E93_16255 | Not Available | Negative | 3343138 - 3343776 | 23239.6 |
| phosphoribosylformylglycinamidine cyclo-ligase | E5E93_16260 | Not Available | Negative | 3343776 - 3344813 | 36905.2 |
| uracil phosphoribosyltransferase | E5E93_16265 | Not Available | Positive | 3345138 - 3345764 | 22534.6 |
| uracil permease | E5E93_16270 | Not Available | Positive | 3345850 - 3347139 | 45009.9 |
| dnaa inactivator hda | E5E93_16275 | Not Available | Positive | 3347189 - 3347935 | 28371.4 |
| arsenate reductase (glutaredoxin) | E5E93_16280 | Not Available | Negative | 3348073 - 3348432 | 13417.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





