Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine--trna ligase | E5E93_16185 | Not Available | Positive | 3325433 - 3326707 | 47032.2 |
| tetratricopeptide repeat protein | E5E93_16190 | Not Available | Positive | 3326725 - 3327345 | 22177.2 |
| outer membrane protein assembly factor bamb | E5E93_16195 | Not Available | Positive | 3327356 - 3328534 | 41873.6 |
| ribosome biogenesis gtpase der | E5E93_16200 | Not Available | Positive | 3328652 - 3330124 | 55039.1 |
| hypothetical protein | E5E93_16205 | Not Available | Positive | 3330193 - 3330408 | 7959.67 |
| exodeoxyribonuclease vii large subunit | E5E93_16210 | Not Available | Negative | 3330405 - 3331775 | 51863.4 |
| imp dehydrogenase | E5E93_16215 | Not Available | Positive | 3331937 - 3333403 | 52025.6 |
| glutamine-hydrolyzing gmp synthase | E5E93_16220 | Not Available | Positive | 3333472 - 3335049 | 58668.5 |
| hypothetical protein | E5E93_16225 | Not Available | Negative | 3335144 - 3335683 | 20231.4 |
| glycine zipper 2tm domain-containing protein | E5E93_16230 | Not Available | Negative | 3335699 - 3336181 | 16373.2 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





