Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | E5E93_16085 | Not Available | Negative | 3301271 - 3302125 | 31445.6 |
| inositol-1-monophosphatase | E5E93_16090 | Not Available | Negative | 3302270 - 3303073 | 29173.8 |
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | E5E93_16095 | Not Available | Positive | 3303192 - 3303932 | 27049.6 |
| fe-s cluster assembly transcriptional regulator iscr | E5E93_16100 | Not Available | Positive | 3304202 - 3304690 | 17337.6 |
| iscs subfamily cysteine desulfurase | E5E93_16105 | Not Available | Positive | 3304802 - 3306016 | 45092.2 |
| fe-s cluster assembly scaffold iscu | E5E93_16110 | Not Available | Positive | 3306044 - 3306430 | 13849.3 |
| iron-sulfur cluster assembly protein isca | E5E93_16115 | Not Available | Positive | 3306447 - 3306770 | 11556.7 |
| co-chaperone hscb | E5E93_16120 | Not Available | Positive | 3306866 - 3307381 | 20108.8 |
| fe-s protein assembly chaperone hsca | E5E93_16125 | Not Available | Positive | 3307398 - 3309248 | 65714.3 |
| isc system 2fe-2s type ferredoxin | E5E93_16130 | Not Available | Positive | 3309250 - 3309585 | 12331.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





