Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system qseef-associated lipoprotein qseg | E5E93_15980 | Not Available | Positive | 3277008 - 3277721 | 27322.4 |
| two-component system response regulator glrr | E5E93_15985 | Not Available | Positive | 3277711 - 3279045 | 49181.3 |
| nitrogen regulatory protein p-ii | E5E93_15990 | Not Available | Positive | 3279106 - 3279444 | 12426.2 |
| no-inducible flavohemoprotein | E5E93_15995 | Not Available | Negative | 3279489 - 3280679 | 43855.0 |
| serine hydroxymethyltransferase | E5E93_16000 | Not Available | Positive | 3281008 - 3282261 | 45303.2 |
| rok family protein | E5E93_16005 | Not Available | Negative | 3282458 - 3283651 | 44592.4 |
| duf5107 domain-containing protein | E5E93_16010 | Not Available | Positive | 3283769 - 3287050 | 123958.0 |
| sugar abc transporter substrate-binding protein | E5E93_16015 | Not Available | Positive | 3287147 - 3288130 | 35069.2 |
| sugar abc transporter atp-binding protein | E5E93_16020 | Not Available | Positive | 3288153 - 3289664 | 54997.7 |
| abc transporter permease | E5E93_16025 | Not Available | Positive | 3289689 - 3290687 | 34475.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





