Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rpoe leader peptide rsed | E5E93_15880 | Not Available | Positive | 3256332 - 3256487 | 6229.83 |
| rna polymerase sigma factor rpoe | E5E93_15885 | Not Available | Positive | 3256484 - 3257059 | 21697.0 |
| anti-sigma-e factor rsea | E5E93_15890 | Not Available | Positive | 3257092 - 3257742 | 24336.8 |
| sigma-e factor regulatory protein rseb | E5E93_15895 | Not Available | Positive | 3257742 - 3258698 | 35751.8 |
| soxr-reducing system protein rsec | E5E93_15900 | Not Available | Positive | 3258695 - 3259174 | 16626.3 |
| elongation factor 4 | E5E93_15905 | Not Available | Positive | 3259372 - 3261171 | 66574.1 |
| signal peptidase i | E5E93_15910 | Not Available | Positive | 3261187 - 3262161 | 35948.3 |
| ribonuclease iii | E5E93_15915 | Not Available | Positive | 3262434 - 3263114 | 25551.6 |
| gtpase era | E5E93_15920 | Not Available | Positive | 3263111 - 3264016 | 33812.1 |
| dna repair protein reco | E5E93_15925 | Not Available | Positive | 3264028 - 3264756 | 27392.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





