Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdp-diacylglycerol--serine o-phosphatidyltransferase | E5E93_15820 | Not Available | Negative | 3242415 - 3243770 | 52804.8 |
| dtw domain-containing protein | E5E93_15830 | Not Available | Negative | 3246575 - 3247273 | 25924.4 |
| thioredoxin trxc | E5E93_15835 | Not Available | Negative | 3247343 - 3247762 | 15555.6 |
| uracil-dna glycosylase | E5E93_15845 | Not Available | Negative | 3249053 - 3249742 | 25677.6 |
| autonomous glycyl radical cofactor grca | E5E93_15850 | Not Available | Positive | 3250047 - 3250430 | 14269.0 |
| cysteine/o-acetylserine transporter | E5E93_15855 | Not Available | Negative | 3250486 - 3251073 | 21307.6 |
| lysr family transcriptional regulator | E5E93_15860 | Not Available | Positive | 3251176 - 3252057 | 33377.3 |
| atp-dependent rna helicase srmb | E5E93_15865 | Not Available | Negative | 3252266 - 3253600 | 49901.0 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase | E5E93_15870 | Not Available | Positive | 3253732 - 3254469 | 27244.3 |
| l-aspartate oxidase | E5E93_15875 | Not Available | Negative | 3254454 - 3256076 | 60282.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





