Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dethiobiotin synthetase biod | E5E93_15130 | Not Available | Positive | 3110002 - 3110697 | 24982.5 |
| voltage-gated clc-type chloride channel clcb | E5E93_15135 | Not Available | Negative | 3110650 - 3111942 | 45690.0 |
| tat proofreading chaperone dmsd | E5E93_15140 | Not Available | Negative | 3112103 - 3112717 | 23345.8 |
| dimethyl sulfoxide reductase anchor subunit | E5E93_15145 | Not Available | Negative | 3112760 - 3113614 | 30472.5 |
| dimethylsulfoxide reductase subunit b | E5E93_15150 | Not Available | Negative | 3113616 - 3114233 | 22752.9 |
| dimethyl sulfoxide reductase subunit a | E5E93_15155 | Not Available | Negative | 3114244 - 3116667 | 90019.1 |
| dimethyl sulfoxide reductase subunit a | E5E93_15160 | Not Available | Negative | 3116728 - 3119154 | 89590.7 |
| duf1161 domain-containing protein | E5E93_15165 | Not Available | Negative | 3119353 - 3119658 | 10491.3 |
| ynfc family lipoprotein | E5E93_15170 | Not Available | Positive | 3119766 - 3120476 | 26508.3 |
| spermidine n1-acetyltransferase | E5E93_15175 | Not Available | Negative | 3120479 - 3121039 | 21902.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





