Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | E5E93_15070 | Not Available | Positive | 3099318 - 3100850 | 54578.5 |
| re/si-specific nad(p)(+) transhydrogenase subunit beta | E5E93_15075 | Not Available | Positive | 3100861 - 3102249 | 48726.0 |
| ai-2 transporter tqsa | E5E93_15080 | Not Available | Negative | 3102274 - 3103308 | 37545.3 |
| hypothetical protein | E5E93_15085 | Not Available | Positive | 3103443 - 3103613 | 6483.71 |
| multidrug/spermidine efflux smr transporter subunit mdtj | E5E93_15090 | Not Available | Positive | 3103720 - 3104085 | 13115.7 |
| multidrug/spermidine efflux smr transporter subunit mdti | E5E93_15095 | Not Available | Positive | 3104072 - 3104401 | 11720.8 |
| serine protease | E5E93_15100 | Not Available | Negative | 3104440 - 3105261 | 29266.6 |
| hypothetical protein | E5E93_15105 | Not Available | Negative | 3105361 - 3105444 | 3206.2 |
| acid shock protein | E5E93_15110 | Not Available | Negative | 3105537 - 3105872 | 11538.0 |
| lysr family transcriptional regulator | E5E93_15120 | Not Available | Positive | 3107628 - 3108521 | 33297.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





