Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1656 domain-containing protein | E5E93_14780 | Not Available | Negative | 3034155 - 3034358 | 7847.01 |
| hth-type transcriptional activator aaer | E5E93_14785 | Not Available | Positive | 3034541 - 3035470 | 34518.1 |
| metalloprotease tldd | E5E93_14790 | Not Available | Negative | 3035598 - 3037043 | 51367.2 |
| asma2 domain-containing protein | E5E93_14795 | Not Available | Negative | 3037383 - 3041183 | 138997.0 |
| ribonuclease g | E5E93_14800 | Not Available | Negative | 3041251 - 3042720 | 55367.4 |
| nucleoside triphosphate pyrophosphatase yhde | E5E93_14805 | Not Available | Negative | 3042710 - 3043303 | 21430.6 |
| rod shape-determining protein mred | E5E93_14810 | Not Available | Negative | 3043312 - 3043800 | 18788.9 |
| rod shape-determining protein mrec | E5E93_14815 | Not Available | Negative | 3043800 - 3044903 | 39562.8 |
| rod shape-determining protein | E5E93_14820 | Not Available | Negative | 3044969 - 3046012 | 36954.7 |
| rnase e specificity factor csrd | E5E93_14825 | Not Available | Negative | 3046317 - 3048257 | 73345.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





