Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane lipid asymmetry maintenance protein mlad | E5E93_14560 | Not Available | Negative | 2989954 - 2990505 | 19577.3 |
| lipid asymmetry maintenance abc transporter permease subunit mlae | E5E93_14565 | Not Available | Negative | 2990510 - 2991292 | 27865.0 |
| calcium/sodium antiporter | E5E93_14575 | Not Available | Positive | 2992320 - 2993297 | 34756.9 |
| arabinose-5-phosphate isomerase kdsd | E5E93_14580 | Not Available | Positive | 2993311 - 2994297 | 35198.3 |
| 3-deoxy-manno-octulosonate-8-phosphatase kdsc | E5E93_14585 | Not Available | Positive | 2994318 - 2994884 | 19998.3 |
| lps export abc transporter periplasmic protein lptc | E5E93_14590 | Not Available | Positive | 2994881 - 2995456 | 21703.8 |
| lipopolysaccharide abc transporter substrate-binding protein lpta | E5E93_14595 | Not Available | Positive | 2995425 - 2995982 | 20128.1 |
| lps export abc transporter atp-binding protein | E5E93_14600 | Not Available | Positive | 2995989 - 2996714 | 26802.3 |
| rna polymerase factor sigma-54 | E5E93_14605 | Not Available | Positive | 2996762 - 2998195 | 53996.8 |
| ribosome hibernation promoting factor | E5E93_14610 | Not Available | Positive | 2998218 - 2998505 | 10697.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





