Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan permease | E5E93_14395 | Not Available | Negative | 2956758 - 2958002 | 44335.2 |
| protein yrbn | E5E93_14405 | Not Available | Negative | 2960039 - 2960119 | 2979.59 |
| lipoprotein nlpi | E5E93_14410 | Not Available | Negative | 2960226 - 2961110 | 33622.5 |
| polyribonucleotide nucleotidyltransferase | E5E93_14415 | Not Available | Negative | 2961219 - 2963354 | 77106.6 |
| 30s ribosomal protein s15 | E5E93_14420 | Not Available | Negative | 2963601 - 2963870 | 10269.4 |
| trna pseudouridine(55) synthase trub | E5E93_14425 | Not Available | Negative | 2964019 - 2964963 | 35089.2 |
| 30s ribosome-binding factor rbfa | E5E93_14430 | Not Available | Negative | 2964963 - 2965364 | 15155.4 |
| translation initiation factor if-2 | E5E93_14435 | Not Available | Negative | 2965528 - 2968200 | 97355.5 |
| transcription termination/antitermination protein nusa | E5E93_14440 | Not Available | Negative | 2968225 - 2969712 | 54874.0 |
| ribosome maturation factor rimp | E5E93_14445 | Not Available | Negative | 2969740 - 2970192 | 16651.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





