Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts n-acetylgalactosamine transporter subunit iid | E5E93_14290 | Not Available | Positive | 2937657 - 2938448 | 28976.1 |
| galactosamine-6-phosphate isomerase | E5E93_14295 | Not Available | Positive | 2938449 - 2939204 | 27783.5 |
| type 1 fimbrial protein | E5E93_14300 | Not Available | Positive | 2939605 - 2940189 | 20565.1 |
| molecular chaperone | E5E93_14305 | Not Available | Positive | 2940269 - 2940964 | 25623.7 |
| fimbrial biogenesis outer membrane usher protein | E5E93_14310 | Not Available | Positive | 2940994 - 2943510 | 93658.4 |
| fimbrial protein | E5E93_14315 | Not Available | Positive | 2943506 - 2944615 | 39171.2 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | E5E93_14320 | Not Available | Negative | 2944658 - 2945518 | 31349.7 |
| yran family protein | E5E93_14330 | Not Available | Positive | 2947576 - 2947971 | 14784.4 |
| dnaa initiator-associating protein diaa | E5E93_14335 | Not Available | Positive | 2947991 - 2948581 | 21091.4 |
| divisome-associated lipoprotein yrap | E5E93_14340 | Not Available | Positive | 2948591 - 2949166 | 20029.1 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





