Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine/serine transporter tdcc | E5E93_14165 | Not Available | Negative | 2913671 - 2915002 | 48881.8 |
| bifunctional threonine ammonia-lyase/l-serine ammonia-lyase tdcb | E5E93_14170 | Not Available | Negative | 2915024 - 2916013 | 35234.5 |
| transcriptional regulator tdca | E5E93_14175 | Not Available | Negative | 2916112 - 2917050 | 34540.9 |
| glycerate 2-kinase | E5E93_14200 | Not Available | Negative | 2920499 - 2921644 | 39135.7 |
| 2-hydroxy-3-oxopropionate reductase | E5E93_14205 | Not Available | Negative | 2921741 - 2922631 | 30661.6 |
| 2-dehydro-3-deoxyglucarate aldolase | E5E93_14210 | Not Available | Negative | 2922661 - 2923431 | 27342.6 |
| mfs transporter | E5E93_14215 | Not Available | Negative | 2923447 - 2924781 | 49012.0 |
| galactarate dehydratase | E5E93_14220 | Not Available | Positive | 2925158 - 2926729 | 56406.9 |
| type ii toxin-antitoxin system prlf family antitoxin | E5E93_14225 | Not Available | Positive | 2926877 - 2927212 | 12319.7 |
| deor family transcriptional regulator | E5E93_14235 | Not Available | Negative | 2927730 - 2928539 | 29559.3 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





