Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 2885039 - 2885115 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 2885313 - 2885389 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 2885393 - 2885485 | Not Available |
| carbon storage regulator csra | E5E93_14025 | Not Available | Negative | 2885803 - 2885988 | 6856.34 |
| alanine--trna ligase | E5E93_14030 | Not Available | Negative | 2886223 - 2888853 | 96007.8 |
| recombination regulator recx | E5E93_14035 | Not Available | Negative | 2888981 - 2889481 | 19411.1 |
| serine/threonine transporter sstt | E5E93_14040 | Not Available | Positive | 2889926 - 2891170 | 43422.3 |
| ygjv family protein | E5E93_14045 | Not Available | Negative | 2891175 - 2891726 | 20590.8 |
| altronate dehydratase | E5E93_14050 | Not Available | Negative | 2891809 - 2893296 | 54096.2 |
| glucuronate isomerase | E5E93_14055 | Not Available | Negative | 2893311 - 2894723 | 53990.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





