Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2002 family protein | E5E93_13900 | Not Available | Negative | 2866520 - 2866864 | 13066.5 |
| duf883 domain-containing protein | E5E93_13905 | Not Available | Positive | 2867016 - 2867345 | 11847.9 |
| glutaredoxin-like protein nrdh | E5E93_13910 | Not Available | Positive | 2867593 - 2867838 | 9139.98 |
| class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdi | E5E93_13915 | Not Available | Positive | 2867835 - 2868245 | 15340.3 |
| class 1b ribonucleoside-diphosphate reductase subunit alpha | E5E93_13920 | Not Available | Positive | 2868218 - 2870362 | 80472.5 |
| class 1b ribonucleoside-diphosphate reductase subunit beta | E5E93_13925 | Not Available | Positive | 2870372 - 2871331 | 36484.1 |
| glycine betaine/l-proline abc transporter atp-binding protein prov | E5E93_13930 | Not Available | Positive | 2871686 - 2872888 | 44165.5 |
| glycine betaine/l-proline abc transporter permease prow | E5E93_13935 | Not Available | Positive | 2872881 - 2873945 | 37580.0 |
| proline/glycine betaine abc transporter substrate-binding protein prox | E5E93_13940 | Not Available | Positive | 2874002 - 2874994 | 36024.4 |
| hypothetical protein | E5E93_13945 | Not Available | Negative | 2875038 - 2875220 | 6908.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





