Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent succinate-semialdehyde dehydrogenase | E5E93_13850 | Not Available | Positive | 2858069 - 2859517 | 51712.0 |
| 4-aminobutyrate--2-oxoglutarate transaminase | E5E93_13855 | Not Available | Positive | 2859531 - 2860811 | 45635.3 |
| gaba permease | E5E93_13860 | Not Available | Positive | 2861123 - 2862523 | 51069.1 |
| dna-binding transcriptional regulator csir | E5E93_13865 | Not Available | Positive | 2862544 - 2863206 | 24992.3 |
| potassium binding protein kbp | E5E93_13870 | Not Available | Negative | 2863207 - 2863656 | 16036.9 |
| yqae/pmp3 family membrane protein | E5E93_13875 | Not Available | Negative | 2863740 - 2863898 | 5865.57 |
| transcriptional regulator | E5E93_13880 | Not Available | Positive | 2864081 - 2864380 | 10627.0 |
| thiosulfate sulfurtransferase ygap | E5E93_13885 | Not Available | Positive | 2864390 - 2864914 | 18605.8 |
| dna-binding protein stpa | E5E93_13890 | Not Available | Negative | 2864961 - 2865365 | 15348.4 |
| l-alanine exporter alae | E5E93_13895 | Not Available | Positive | 2866034 - 2866483 | 16931.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





