Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yaii/yqxd family protein | E5E93_13735 | Not Available | Negative | 2833867 - 2834325 | 16970.4 |
| pyrroline-5-carboxylate reductase | E5E93_13740 | Not Available | Positive | 2834445 - 2835254 | 28146.6 |
| diguanylate cyclase adra | E5E93_13745 | Not Available | Negative | 2835271 - 2836386 | 41545.0 |
| phosphate starvation-inducible protein psif | E5E93_13750 | Not Available | Negative | 2836488 - 2836808 | 11687.2 |
| anti-adapter protein irap | E5E93_13760 | Not Available | Negative | 2838442 - 2838702 | 9938.05 |
| d-alanine--d-alanine ligase a | E5E93_13765 | Not Available | Positive | 2839166 - 2840260 | 39318.0 |
| duf2754 family protein | E5E93_13770 | Not Available | Negative | 2840284 - 2840496 | 8115.96 |
| duf2755 family protein | E5E93_13775 | Not Available | Positive | 2840756 - 2841064 | 11425.2 |
| surface-exposed outer membrane lipoprotein yaiw | E5E93_13780 | Not Available | Negative | 2841123 - 2842217 | 40399.5 |
| d-alanyl-d-alanine- carboxypeptidase/endopeptidase amph | E5E93_13790 | Not Available | Positive | 2843803 - 2844960 | 41865.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





