Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exonuclease subunit sbcd | E5E93_13680 | Not Available | Positive | 2823242 - 2824444 | 44716.1 |
| exonuclease subunit sbcc | E5E93_13685 | Not Available | Positive | 2824441 - 2827584 | 118547.0 |
| mfs transporter araj | E5E93_13690 | Not Available | Positive | 2827710 - 2828894 | 41943.1 |
| fructokinase | E5E93_13695 | Not Available | Negative | 2829037 - 2829945 | 32416.5 |
| recombination-associated protein rdgc | E5E93_13700 | Not Available | Positive | 2830070 - 2830981 | 33995.3 |
| hypothetical protein | E5E93_13705 | Not Available | Negative | 2831059 - 2831142 | 3214.97 |
| pyrimidine/purine nucleoside phosphorylase | E5E93_13715 | Not Available | Negative | 2831628 - 2831912 | 10234.9 |
| arom family protein | E5E93_13720 | Not Available | Negative | 2831984 - 2832661 | 24922.4 |
| protein yaia | E5E93_13725 | Not Available | Negative | 2832919 - 2833110 | 7281.55 |
| shikimate kinase arol | E5E93_13730 | Not Available | Negative | 2833160 - 2833684 | 19151.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





