Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p-ii family nitrogen regulator | E5E93_13405 | Not Available | Negative | 2764980 - 2765318 | 12259.9 |
| smdb family multidrug efflux abc transporter permease/atp-binding protein | E5E93_13410 | Not Available | Negative | 2765499 - 2767280 | 65258.6 |
| smda family multidrug abc transporter permease/atp-binding protein | E5E93_13415 | Not Available | Negative | 2767273 - 2769045 | 66034.3 |
| lrp/asnc family transcriptional regulator | E5E93_13420 | Not Available | Negative | 2769075 - 2769533 | 17438.4 |
| sgrr family transcriptional regulator | E5E93_13430 | Not Available | Positive | 2770605 - 2772305 | 64936.2 |
| 7-cyano-7-deazaguanine synthase quec | E5E93_13435 | Not Available | Positive | 2772370 - 2773065 | 25481.5 |
| ybgc/fadm family acyl-coa thioesterase | E5E93_13440 | Not Available | Negative | 2773117 - 2773515 | 15089.2 |
| hypothetical protein | E5E93_13445 | Not Available | Negative | 2773609 - 2773980 | 12734.4 |
| peptidylprolyl isomerase | E5E93_13450 | Not Available | Negative | 2774131 - 2776002 | 68165.8 |
| dna-binding protein hu-beta | E5E93_13455 | Not Available | Negative | 2776194 - 2776466 | 9226.08 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





