Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybab/ebfc family nucleoid-associated protein | E5E93_13300 | Not Available | Negative | 2743512 - 2743841 | 12015.6 |
| dna polymerase iii subunit gamma/tau | E5E93_13305 | Not Available | Negative | 2743893 - 2745824 | 71085.7 |
| adenine phosphoribosyltransferase | E5E93_13310 | Not Available | Negative | 2745953 - 2746504 | 19860.1 |
| duf454 family protein | E5E93_13315 | Not Available | Negative | 2746657 - 2747034 | 14771.0 |
| primosomal replication protein n'' | E5E93_13320 | Not Available | Positive | 2747104 - 2747631 | 20360.5 |
| duf2496 domain-containing protein | E5E93_13325 | Not Available | Positive | 2747645 - 2747806 | 6094.32 |
| mechanosensitive channel msck | E5E93_13330 | Not Available | Negative | 2748018 - 2751380 | 127240.0 |
| multidrug efflux transporter transcriptional repressor acrr | E5E93_13335 | Not Available | Negative | 2751508 - 2752155 | 24768.1 |
| multidrug efflux rnd transporter periplasmic adaptor subunit acra | E5E93_13340 | Not Available | Positive | 2752297 - 2753490 | 42199.1 |
| multidrug efflux rnd transporter permease subunit | E5E93_13345 | Not Available | Positive | 2753513 - 2756662 | 113580.0 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





