Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional activator alls | E5E93_12885 | Not Available | Positive | 2656654 - 2657580 | 34513.6 |
| trna 2-selenouridine(34) synthase mnmh | E5E93_12890 | Not Available | Positive | 2657649 - 2658743 | 41014.1 |
| rep-associated tyrosine transposase rayt | E5E93_12895 | Not Available | Negative | 2659604 - 2660101 | 19983.9 |
| peptidoglycan endopeptidase | E5E93_12900 | Not Available | Negative | 2660277 - 2661026 | 28800.4 |
| type ii toxin-antitoxin system antitoxin dinj | E5E93_12905 | Not Available | Positive | 2661236 - 2661496 | 9334.27 |
| type ii toxin-antitoxin system mrna interferase toxin yafq | E5E93_12910 | Not Available | Positive | 2661499 - 2661777 | 10831.2 |
| murein l,d-transpeptidase | E5E93_12915 | Not Available | Positive | 2661933 - 2662673 | 28022.8 |
| class ii glutamine amidotransferase | E5E93_12920 | Not Available | Negative | 2662644 - 2663411 | 28580.1 |
| d-sedoheptulose 7-phosphate isomerase | E5E93_12925 | Not Available | Negative | 2663617 - 2664195 | 20816.0 |
| acyl-coa dehydrogenase | E5E93_12930 | Not Available | Positive | 2664435 - 2666879 | 89201.6 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





