Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (s)-ureidoglycine aminohydrolase | E5E93_12835 | Not Available | Positive | 2644829 - 2645614 | 28691.1 |
| glycerate 3-kinase | E5E93_12840 | Not Available | Negative | 2645842 - 2646987 | 38835.1 |
| uracil/xanthine transporter | E5E93_12845 | Not Available | Negative | 2647009 - 2648310 | 47210.1 |
| allantoinase allb | E5E93_12850 | Not Available | Negative | 2648367 - 2649728 | 49588.4 |
| putative allantoin permease | E5E93_12855 | Not Available | Negative | 2649788 - 2651242 | 52449.2 |
| 2-hydroxy-3-oxopropionate reductase | E5E93_12860 | Not Available | Negative | 2651411 - 2652289 | 30813.5 |
| hydroxypyruvate isomerase | E5E93_12865 | Not Available | Negative | 2652389 - 2653165 | 29370.1 |
| glyoxylate carboligase | E5E93_12870 | Not Available | Negative | 2653178 - 2654959 | 64765.5 |
| hth-type transcriptional repressor allr | E5E93_12875 | Not Available | Negative | 2655049 - 2655864 | 29271.4 |
| ureidoglycolate lyase | E5E93_12880 | Not Available | Negative | 2655942 - 2656424 | 18223.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





