Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine--trna ligase | E5E93_12780 | Not Available | Negative | 2632936 - 2634321 | 52186.9 |
| peptidylprolyl isomerase b | E5E93_12785 | Not Available | Positive | 2634495 - 2634989 | 18154.5 |
| udp-2,3-diacylglucosamine diphosphatase | E5E93_12790 | Not Available | Positive | 2634992 - 2635714 | 26925.8 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | E5E93_12795 | Not Available | Positive | 2635832 - 2636341 | 17781.3 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | E5E93_12800 | Not Available | Positive | 2636338 - 2637405 | 39418.3 |
| duf2877 domain-containing protein | E5E93_12810 | Not Available | Negative | 2638433 - 2639248 | 29671.9 |
| duf1116 domain-containing protein | E5E93_12815 | Not Available | Negative | 2639259 - 2640518 | 44968.7 |
| acyl-coa synthetase fdra | E5E93_12820 | Not Available | Negative | 2640528 - 2642195 | 58535.3 |
| ureidoglycolate dehydrogenase | E5E93_12825 | Not Available | Positive | 2642512 - 2643561 | 37894.2 |
| allantoate deiminase | E5E93_12830 | Not Available | Positive | 2643583 - 2644818 | 45568.3 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





