Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4434 family protein | E5E93_12720 | Not Available | Positive | 2622234 - 2623124 | 33039.5 |
| arac family transcriptional regulator | E5E93_12725 | Not Available | Positive | 2623307 - 2624068 | 29006.5 |
| Trna-arg | Not Available | Not Available | Positive | 2624114 - 2624190 | Not Available |
| fimbriae assembly protein | E5E93_12740 | Not Available | Negative | 2625071 - 2625586 | 18195.6 |
| fimbrial biogenesis outer membrane usher protein | E5E93_12750 | Not Available | Negative | 2626617 - 2629226 | 96058.6 |
| type 1 fimbriae chaperone fimc | E5E93_12755 | Not Available | Negative | 2629257 - 2629949 | 25487.2 |
| type 1 fimbrial protein subunit fima | E5E93_12760 | Not Available | Negative | 2630169 - 2630711 | 18547.5 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | E5E93_12765 | Not Available | Positive | 2631191 - 2632057 | 31015.6 |
| ribosome-associated protein ybcj | E5E93_12770 | Not Available | Positive | 2632059 - 2632271 | 7389.95 |
| metal-dependent hydrolase | E5E93_12775 | Not Available | Positive | 2632379 - 2632900 | 19515.5 |
Pathways
12929 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





